Christen, Patrik

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Patrik
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Patrik Christen

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Formation dominates resorption with increasing mineralized density and time postfracture in cortical but not trabecular bone: a longitudinal HRpQCT imaging study in the distal radius

2021, Atkins, Penny R., Stock, Kerstin, Ohs, Nicholas, Collins, Caitlyn J., Horling, Lukas, Benedikt, Stefan, Degenhart, Gerald, Lippuner, Kurt, Blauth, Michael, Christen, Patrik, Müller, Ralph

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Automated segmentation of fractured distal radii by 3D geodesic active contouring of in vivo HR-pQCT images

2021, Ohs, Nicholas, Collins, Caitlyn J., Tourolle, Duncan C., Atkins, Penny R., Schroeder, Bryant J., Blauth, Michael, Christen, Patrik, Müller, Ralph

Radius fractures are among the most common fracture types; however, there is limited consensus on the standard of care. A better understanding of the fracture healing process could help to shape future treatment protocols and thus improve functional outcomes of patients. High-resolution peripheral quantitative computed tomography (HR-pQCT) allows monitoring and evaluation of the radius on the micro-structural level, which is crucial to our understanding of fracture healing. However, current radius fracture studies using HR-pQCT are limited by the lack of automated contouring routines, hence only including small number of patients due to the prohibitively time-consuming task of manually contouring HR-pQCT images. In the present study, a new method to automatically contour images of distal radius fractures based on 3D morphological geodesic active contours (3D-GAC) is presented. Contours of 60 HR-pQCT images of fractured and conservatively treated radii spanning the healing process up to one year post-fracture are compared to the current gold standard, hand-drawn 2D contours, to assess the accuracy of the algorithm. Furthermore, robustness was established by applying the algorithm to HR-pQCT images of intact radii of 73 patients and comparing the resulting morphometric indices to the gold standard patient evaluation including a threshold- and dilation-based contouring approach. Reproducibility was evaluated using repeat scans of intact radii of 19 patients. The new 3D-GAC approach offers contours within inter-operator variability for images of fractured distal radii (mean Dice score of 0.992 ± 0.004 versus median operator Dice score of 0.993 ± 0.006). The generated contours for images of intact radii yielded morphometric indices within the in vivo reproducibility limits compared to the current gold standard. Additionally, the 3D-GAC approach shows an improved robustness against failure (n = 4) when dealing with cortical interruptions, fracture fragments, etc. compared with the automatic, default manufacturer pipeline (n = 40). Using the 3D-GAC approach assures consistent results, while reducing the need for time-consuming hand-contouring.